Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Gm13035-201ENSMUST00000117496 342 ntBASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Gm32999-201ENSMUST00000192693 562 ntBASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Gm17812-201ENSMUST00000204935 318 ntBASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a6Q8C6K9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gm15515-201ENSMUST00000117827 822 ntBASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gm11675-201ENSMUST00000121873 832 ntBASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gm37246-201ENSMUST00000192665 835 ntBASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Col6a6Q8C6K9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms