Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usp44Q8C2S0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Gm12314-201ENSMUST00000118104 538 ntBASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Gm13875-201ENSMUST00000120162 282 ntBASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Gm13342-201ENSMUST00000121055 207 ntBASIC14.84□□□□□ -0.03
Usp44Q8C2S0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Gm27243-201ENSMUST00000183964 521 ntBASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Gm18304-201ENSMUST00000189162 546 ntBASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Usp44Q8C2S0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Usp44Q8C2S0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp44Q8C2S0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Usp44Q8C2S0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp44Q8C2S0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp44Q8C2S0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm6023-201ENSMUST00000118217 606 ntBASIC14.83□□□□□ -0.04
Usp44Q8C2S0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm27572-201ENSMUST00000183702 255 ntBASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm10478-201ENSMUST00000084451 396 ntBASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp44Q8C2S0 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Gm12058-201ENSMUST00000118614 437 ntBASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Gm17420-201ENSMUST00000164753 153 ntBASIC14.82□□□□□ -0.04
Usp44Q8C2S0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms