Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tsen54Q8C2A2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tsen54Q8C2A2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tsen54Q8C2A2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Gm5866-201ENSMUST00000177881 973 ntBASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tsen54Q8C2A2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Tsen54Q8C2A2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Map1b-203ENSMUST00000223725 2669 ntBASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Gm19931-201ENSMUST00000198920 368 ntBASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Tsen54Q8C2A2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms