Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC16.75■□□□□ 0.27
Cps1Q8C196 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cps1Q8C196 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cps1Q8C196 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cps1Q8C196 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cps1Q8C196 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.75■□□□□ 0.27
Cps1Q8C196 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cps1Q8C196 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cps1Q8C196 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC16.75■□□□□ 0.27
Cps1Q8C196 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC16.75■□□□□ 0.27
Cps1Q8C196 AC166344.1-201ENSMUST00000223745 674 ntBASIC16.75■□□□□ 0.27
Cps1Q8C196 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.75■□□□□ 0.27
Cps1Q8C196 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cps1Q8C196 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cps1Q8C196 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cps1Q8C196 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cps1Q8C196 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Cps1Q8C196 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.74■□□□□ 0.27
Cps1Q8C196 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Gm13910-201ENSMUST00000121752 1428 ntBASIC16.74■□□□□ 0.27
Cps1Q8C196 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cps1Q8C196 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC16.74■□□□□ 0.27
Cps1Q8C196 Gm6867-201ENSMUST00000219165 425 ntBASIC16.74■□□□□ 0.27
Cps1Q8C196 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Gm18782-201ENSMUST00000209023 1399 ntBASIC16.74■□□□□ 0.27
Cps1Q8C196 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cps1Q8C196 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cps1Q8C196 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Cps1Q8C196 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.73■□□□□ 0.27
Cps1Q8C196 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.73■□□□□ 0.27
Cps1Q8C196 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.73■□□□□ 0.27
Cps1Q8C196 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cps1Q8C196 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Gm37299-201ENSMUST00000193951 826 ntBASIC16.73■□□□□ 0.27
Cps1Q8C196 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC16.73■□□□□ 0.27
Cps1Q8C196 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC16.73■□□□□ 0.27
Cps1Q8C196 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cps1Q8C196 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.73■□□□□ 0.27
Cps1Q8C196 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cps1Q8C196 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cps1Q8C196 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cps1Q8C196 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.73■□□□□ 0.27
Cps1Q8C196 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cps1Q8C196 Gm25076-201ENSMUST00000104098 132 ntBASIC16.72■□□□□ 0.27
Cps1Q8C196 Gm11949-201ENSMUST00000117640 372 ntBASIC16.72■□□□□ 0.27
Cps1Q8C196 Gm15725-201ENSMUST00000119947 1090 ntBASIC16.72■□□□□ 0.27
Cps1Q8C196 Gm14585-201ENSMUST00000120713 634 ntBASIC16.72■□□□□ 0.27
Cps1Q8C196 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC16.72■□□□□ 0.27
Cps1Q8C196 Gm25072-201ENSMUST00000175233 235 ntBASIC16.72■□□□□ 0.27
Cps1Q8C196 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cps1Q8C196 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.72■□□□□ 0.27
Cps1Q8C196 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC16.72■□□□□ 0.27
Cps1Q8C196 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cps1Q8C196 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.71■□□□□ 0.27
Cps1Q8C196 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cps1Q8C196 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cps1Q8C196 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.71■□□□□ 0.27
Cps1Q8C196 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cps1Q8C196 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms