Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm44405-201ENSMUST00000198952 126 ntBASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap1Q8BTW8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm12058-201ENSMUST00000118614 437 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm25668-201ENSMUST00000157700 129 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm16296-201ENSMUST00000159905 325 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm8018-201ENSMUST00000173536 789 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Gm31256-201ENSMUST00000194705 506 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap1Q8BTW8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms