Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm19963-201ENSMUST00000208413 1255 ntBASIC13□□□□□ -0.33
Nup54Q8BTS4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm10371-202ENSMUST00000228010 1081 ntBASIC13□□□□□ -0.33
Nup54Q8BTS4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm13875-201ENSMUST00000120162 282 ntBASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.99□□□□□ -0.33
Nup54Q8BTS4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm6621-201ENSMUST00000193251 772 ntBASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm6334-201ENSMUST00000207083 228 ntBASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm45865-201ENSMUST00000211815 945 ntBASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup54Q8BTS4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm13342-201ENSMUST00000121055 207 ntBASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm2546-201ENSMUST00000182630 991 ntBASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Cts7-204ENSMUST00000225321 1257 ntBASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Olfr582-201ENSMUST00000098212 960 ntBASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms