Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sfr1Q8BP27 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sfr1Q8BP27 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13□□□□□ -0.33
Sfr1Q8BP27 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sfr1Q8BP27 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sfr1Q8BP27 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Sfr1Q8BP27 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sfr1Q8BP27 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13□□□□□ -0.33
Sfr1Q8BP27 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sfr1Q8BP27 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Sfr1Q8BP27 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sfr1Q8BP27 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Sfr1Q8BP27 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gm22121-201ENSMUST00000175148 54 ntBASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gm27514-201ENSMUST00000183692 110 ntBASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.99□□□□□ -0.33
Sfr1Q8BP27 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm14704-201ENSMUST00000120300 874 ntBASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm37424-201ENSMUST00000191727 561 ntBASIC12.98□□□□□ -0.33
Sfr1Q8BP27 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.98□□□□□ -0.33
Sfr1Q8BP27 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms