Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Gm17826-201ENSMUST00000189720 798 ntBASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Gm5419-201ENSMUST00000119301 527 ntBASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Gm37028-201ENSMUST00000194276 107 ntBASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col16a1Q8BLX7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.33■□□□□ 0.21
Col16a1Q8BLX7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col16a1Q8BLX7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col16a1Q8BLX7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col16a1Q8BLX7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col16a1Q8BLX7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Gm11511-201ENSMUST00000118146 540 ntBASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Gm16166-201ENSMUST00000118291 787 ntBASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Rprl1-201ENSMUST00000158050 327 ntBASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Gm18711-201ENSMUST00000199341 750 ntBASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col16a1Q8BLX7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Gm28388-201ENSMUST00000186262 437 ntBASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Gm37299-201ENSMUST00000193951 826 ntBASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Gm3028-201ENSMUST00000213805 1119 ntBASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Col16a1Q8BLX7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Gm18041-201ENSMUST00000218210 618 ntBASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col16a1Q8BLX7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms