Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdhr3Q8BL00 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdhr3Q8BL00 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdhr3Q8BL00 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdhr3Q8BL00 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Gm2495-201ENSMUST00000191160 466 ntBASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Gm19184-201ENSMUST00000196798 928 ntBASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdhr3Q8BL00 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdhr3Q8BL00 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdhr3Q8BL00 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 1881.4 ms