Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Gm12857-201ENSMUST00000117678 592 ntBASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.45□□□□□ -0.74
Smg1Q8BKX6 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smg1Q8BKX6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm23085-201ENSMUST00000157849 293 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm16380-201ENSMUST00000077997 478 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm11836-201ENSMUST00000121022 441 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smg1Q8BKX6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.43□□□□□ -0.74
Smg1Q8BKX6 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smg1Q8BKX6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms