Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2bQ8BJF9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Gm13813-201ENSMUST00000120998 787 ntBASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Gm28693-202ENSMUST00000190758 331 ntBASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Gm18473-201ENSMUST00000220543 868 ntBASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Gm16372-201ENSMUST00000073088 450 ntBASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Gm2423-201ENSMUST00000074863 733 ntBASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chmp2bQ8BJF9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Gm12859-201ENSMUST00000117834 427 ntBASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Gm12539-201ENSMUST00000121549 1098 ntBASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp2bQ8BJF9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms