Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Gm8805-201ENSMUST00000117848 313 ntBASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Gm6152-201ENSMUST00000151704 340 ntBASIC12.28□□□□□ -0.44
Rnf38Q8BI21 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Rnf38Q8BI21 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Gm28693-202ENSMUST00000190758 331 ntBASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf38Q8BI21 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf38Q8BI21 Gm12291-201ENSMUST00000121627 311 ntBASIC12.26□□□□□ -0.45
Rnf38Q8BI21 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms