Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Gm27437-201ENSMUST00000183429 107 ntBASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Gm37917-201ENSMUST00000194711 392 ntBASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Gm19931-201ENSMUST00000198920 368 ntBASIC12.07□□□□□ -0.48
Krr1Q8BGA5 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Krr1Q8BGA5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Gm18624-201ENSMUST00000220966 658 ntBASIC12.06□□□□□ -0.48
Krr1Q8BGA5 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Gm2423-201ENSMUST00000074863 733 ntBASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Krr1Q8BGA5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Gm7488-201ENSMUST00000117148 684 ntBASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Gm12859-201ENSMUST00000117834 427 ntBASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.05□□□□□ -0.48
Krr1Q8BGA5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms