Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim36Q80WG7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.29□□□□□ -0.44
Trim36Q80WG7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim36Q80WG7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.28□□□□□ -0.44
Trim36Q80WG7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.28□□□□□ -0.44
Trim36Q80WG7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Gm11814-201ENSMUST00000119515 929 ntBASIC12.28□□□□□ -0.44
Trim36Q80WG7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.28□□□□□ -0.44
Trim36Q80WG7 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.28□□□□□ -0.44
Trim36Q80WG7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.28□□□□□ -0.44
Trim36Q80WG7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim36Q80WG7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim36Q80WG7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim36Q80WG7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim36Q80WG7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gm37444-201ENSMUST00000193605 439 ntBASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gm38223-201ENSMUST00000194484 695 ntBASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gm43630-201ENSMUST00000201550 776 ntBASIC12.27□□□□□ -0.45
Trim36Q80WG7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gm9899-201ENSMUST00000065519 555 ntBASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms