Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Gm22058-201ENSMUST00000083393 310 ntBASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.68□□□□□ -0.38
Rpp38Q80UU2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Gm22018-201ENSMUST00000104357 131 ntBASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Gm5370-201ENSMUST00000187187 574 ntBASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Gm19309-201ENSMUST00000218295 205 ntBASIC12.68□□□□□ -0.38
Rpp38Q80UU2 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpp38Q80UU2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gm37424-201ENSMUST00000191727 561 ntBASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gm37008-201ENSMUST00000195712 319 ntBASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gm5904-201ENSMUST00000210286 865 ntBASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gm45925-201ENSMUST00000218882 744 ntBASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.67□□□□□ -0.38
Rpp38Q80UU2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpp38Q80UU2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms