Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Gm31256-201ENSMUST00000194705 506 ntBASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm14726-201ENSMUST00000120623 896 ntBASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm44405-201ENSMUST00000198952 126 ntBASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh19Q80TF3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Mir877-201ENSMUST00000104738 85 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm13813-201ENSMUST00000120998 787 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm27023-201ENSMUST00000182372 285 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm37259-201ENSMUST00000193903 849 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh19Q80TF3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms