Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Gm44999-201ENSMUST00000207456 1493 ntBASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Gm9555-201ENSMUST00000200908 583 ntBASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Gm9826-201ENSMUST00000029124 1299 ntBASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Syne1Q6ZWR6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm43399-201ENSMUST00000202546 2374 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 AC125486.1-201ENSMUST00000218701 320 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm4366-201ENSMUST00000201488 1342 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm17812-201ENSMUST00000204935 318 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm5846-201ENSMUST00000193146 1414 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm8856-201ENSMUST00000185254 1144 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Rprl1-202ENSMUST00000198476 238 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm8099-201ENSMUST00000200510 742 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm43908-201ENSMUST00000205074 1472 ntBASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Syne1Q6ZWR6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms