Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm12501-201ENSMUST00000119163 529 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm17391-201ENSMUST00000171036 126 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm43916-201ENSMUST00000205062 967 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm45219-201ENSMUST00000205602 465 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm17827-201ENSMUST00000211825 742 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Gm25881-201ENSMUST00000157783 103 ntBASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Mir6546-201ENSMUST00000184460 62 ntBASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Gm4482-201ENSMUST00000200876 742 ntBASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Gm1821-202ENSMUST00000227415 750 ntBASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx55Q6ZPL9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Gm24934-201ENSMUST00000103764 111 ntBASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Gm12029-201ENSMUST00000120073 832 ntBASIC14.37□□□□□ -0.11
Ddx55Q6ZPL9 Gm12196-201ENSMUST00000120954 262 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms