Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm25700-201ENSMUST00000177693 110 ntBASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm44958-201ENSMUST00000203734 736 ntBASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm10076-201ENSMUST00000073238 384 ntBASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Gm44967-201ENSMUST00000207047 631 ntBASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88cQ6VGS5 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Gm8385-201ENSMUST00000058999 643 ntBASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88cQ6VGS5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Gm24845-201ENSMUST00000158034 109 ntBASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Gm45925-201ENSMUST00000218882 744 ntBASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc88cQ6VGS5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88cQ6VGS5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88cQ6VGS5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88cQ6VGS5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc88cQ6VGS5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc88cQ6VGS5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc88cQ6VGS5 Gm2383-201ENSMUST00000181461 807 ntBASIC14□□□□□ -0.17
Ccdc88cQ6VGS5 Gm29199-201ENSMUST00000187766 775 ntBASIC14□□□□□ -0.17
Ccdc88cQ6VGS5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms