Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Gm5369-201ENSMUST00000217499 588 ntBASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.25□□□□□ -0.29
Ccdc85bQ6PDY0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Gm12380-201ENSMUST00000119012 544 ntBASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Gm14704-201ENSMUST00000120300 874 ntBASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Gm10076-201ENSMUST00000073238 384 ntBASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc85bQ6PDY0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm14058-201ENSMUST00000116082 735 ntBASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm13492-201ENSMUST00000119772 665 ntBASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm9358-201ENSMUST00000183067 927 ntBASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm34023-201ENSMUST00000195539 217 ntBASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm45925-201ENSMUST00000218882 744 ntBASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc85bQ6PDY0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc85bQ6PDY0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc85bQ6PDY0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc85bQ6PDY0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc85bQ6PDY0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc85bQ6PDY0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms