Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Gm23596-201ENSMUST00000104304 132 ntBASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Gm4157-201ENSMUST00000211647 679 ntBASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Ginm1-202ENSMUST00000065124 300 ntBASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chd4Q6PDQ2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd4Q6PDQ2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC16.27■□□□□ 0.19
Chd4Q6PDQ2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd4Q6PDQ2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd4Q6PDQ2 Gm9540-201ENSMUST00000188230 478 ntBASIC16.27■□□□□ 0.19
Chd4Q6PDQ2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd4Q6PDQ2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chd4Q6PDQ2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chd4Q6PDQ2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.26■□□□□ 0.19
Chd4Q6PDQ2 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gm14724-201ENSMUST00000118400 537 ntBASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gm45219-201ENSMUST00000205602 465 ntBASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Rprl1-201ENSMUST00000158050 327 ntBASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gm44545-201ENSMUST00000208262 746 ntBASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Gm10179-201ENSMUST00000086233 688 ntBASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd4Q6PDQ2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms