Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Gm4984-201ENSMUST00000115987 360 ntBASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Gm11591-201ENSMUST00000120063 702 ntBASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Gm25261-201ENSMUST00000157416 134 ntBASIC14.21□□□□□ -0.13
Usp49Q6P9L4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.21□□□□□ -0.13
Usp49Q6P9L4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Usp49Q6P9L4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Usp49Q6P9L4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp49Q6P9L4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usp49Q6P9L4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Matn2-203ENSMUST00000226766 3252 ntBASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Gm15703-201ENSMUST00000120250 880 ntBASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp49Q6P9L4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp49Q6P9L4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp49Q6P9L4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp49Q6P9L4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp49Q6P9L4 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.18□□□□□ -0.14
Usp49Q6P9L4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp49Q6P9L4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms