Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm4Q6IRU2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm4Q6IRU2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm4Q6IRU2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tpm4Q6IRU2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Tpm4Q6IRU2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm4Q6IRU2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm4Q6IRU2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm4Q6IRU2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm4Q6IRU2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Gm15429-201ENSMUST00000151268 798 ntBASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Tpm4Q6IRU2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Gm37917-201ENSMUST00000194711 392 ntBASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms