Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Scube3Q66PY1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scube3Q66PY1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scube3Q66PY1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scube3Q66PY1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scube3Q66PY1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.46□□□□□ -0.25
Scube3Q66PY1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scube3Q66PY1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13.46□□□□□ -0.25
Scube3Q66PY1 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Gm8738-201ENSMUST00000172606 329 ntBASIC13.46□□□□□ -0.25
Scube3Q66PY1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Scube3Q66PY1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scube3Q66PY1 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm37709-201ENSMUST00000195074 600 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm38092-201ENSMUST00000195600 653 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm43133-201ENSMUST00000197472 463 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.45□□□□□ -0.26
Scube3Q66PY1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Scube3Q66PY1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Gm26474-201ENSMUST00000116762 122 ntBASIC13.44□□□□□ -0.26
Scube3Q66PY1 Gm14921-201ENSMUST00000118643 908 ntBASIC13.44□□□□□ -0.26
Scube3Q66PY1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Scube3Q66PY1 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.44□□□□□ -0.26
Scube3Q66PY1 Gm38217-201ENSMUST00000194358 910 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms