Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC15.03■□□□□ -0
Col11a2Q64739 AC140375.1-201ENSMUST00000225421 694 ntBASIC15.03■□□□□ -0
Col11a2Q64739 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col11a2Q64739 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.03■□□□□ -0
Col11a2Q64739 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.03■□□□□ -0
Col11a2Q64739 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col11a2Q64739 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Col11a2Q64739 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col11a2Q64739 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Col11a2Q64739 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.02□□□□□ -0.01
Col11a2Q64739 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC15.02□□□□□ -0.01
Col11a2Q64739 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.02□□□□□ -0.01
Col11a2Q64739 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.02□□□□□ -0.01
Col11a2Q64739 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm26035-201ENSMUST00000083065 308 ntBASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.02□□□□□ -0.01
Col11a2Q64739 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Col11a2Q64739 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.02□□□□□ -0.01
Col11a2Q64739 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col11a2Q64739 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.01□□□□□ -0.01
Col11a2Q64739 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC15.01□□□□□ -0.01
Col11a2Q64739 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Gm26013-201ENSMUST00000104404 119 ntBASIC15.01□□□□□ -0.01
Col11a2Q64739 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.01□□□□□ -0.01
Col11a2Q64739 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC15.01□□□□□ -0.01
Col11a2Q64739 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Gm18706-201ENSMUST00000210053 1066 ntBASIC15.01□□□□□ -0.01
Col11a2Q64739 Mt1-202ENSMUST00000211807 1085 ntBASIC15.01□□□□□ -0.01
Col11a2Q64739 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.01□□□□□ -0.01
Col11a2Q64739 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.01□□□□□ -0.01
Col11a2Q64739 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.01□□□□□ -0.01
Col11a2Q64739 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col11a2Q64739 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col11a2Q64739 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Col11a2Q64739 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Gm15784-201ENSMUST00000120260 1462 ntBASIC15.01□□□□□ -0.01
Col11a2Q64739 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Gm7278-201ENSMUST00000119836 1401 ntBASIC15.01□□□□□ -0.01
Col11a2Q64739 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col11a2Q64739 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col11a2Q64739 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Col11a2Q64739 Gm15207-201ENSMUST00000119259 442 ntBASIC15□□□□□ -0.01
Col11a2Q64739 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col11a2Q64739 Gm8531-201ENSMUST00000188319 893 ntBASIC15□□□□□ -0.01
Col11a2Q64739 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col11a2Q64739 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col11a2Q64739 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col11a2Q64739 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col11a2Q64739 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Col11a2Q64739 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col11a2Q64739 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col11a2Q64739 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms