Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.26□□□□□ -0.45
Sdc3Q64519 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sdc3Q64519 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Mir874-201ENSMUST00000104769 76 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Gm14704-201ENSMUST00000120300 874 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.25□□□□□ -0.45
Sdc3Q64519 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Sdc3Q64519 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sdc3Q64519 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm11793-201ENSMUST00000120433 981 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm16379-201ENSMUST00000161469 348 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.24□□□□□ -0.45
Sdc3Q64519 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.24□□□□□ -0.45
Sdc3Q64519 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm3890-201ENSMUST00000182416 207 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm8762-201ENSMUST00000193486 339 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm19931-201ENSMUST00000198920 368 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.24□□□□□ -0.45
Sdc3Q64519 Gm6334-201ENSMUST00000207083 228 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.24□□□□□ -0.45
Sdc3Q64519 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.24□□□□□ -0.45
Sdc3Q64519 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sdc3Q64519 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sdc3Q64519 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.24□□□□□ -0.45
Sdc3Q64519 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc3Q64519 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sdc3Q64519 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sdc3Q64519 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms