Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.14■□□□□ 0.17
Clcn1Q64347 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Clcn1Q64347 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.14■□□□□ 0.17
Clcn1Q64347 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.14■□□□□ 0.17
Clcn1Q64347 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.14■□□□□ 0.17
Clcn1Q64347 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clcn1Q64347 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clcn1Q64347 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Gm9083-201ENSMUST00000120423 819 ntBASIC16.13■□□□□ 0.17
Clcn1Q64347 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.13■□□□□ 0.17
Clcn1Q64347 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Gm24514-201ENSMUST00000174961 285 ntBASIC16.13■□□□□ 0.17
Clcn1Q64347 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.13■□□□□ 0.17
Clcn1Q64347 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.13■□□□□ 0.17
Clcn1Q64347 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.13■□□□□ 0.17
Clcn1Q64347 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Clcn1Q64347 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clcn1Q64347 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.12■□□□□ 0.17
Clcn1Q64347 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Gm13492-201ENSMUST00000119772 665 ntBASIC16.12■□□□□ 0.17
Clcn1Q64347 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.12■□□□□ 0.17
Clcn1Q64347 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.12■□□□□ 0.17
Clcn1Q64347 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.12■□□□□ 0.17
Clcn1Q64347 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.12■□□□□ 0.17
Clcn1Q64347 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.12■□□□□ 0.17
Clcn1Q64347 Gzmn-202ENSMUST00000225535 989 ntBASIC16.12■□□□□ 0.17
Clcn1Q64347 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clcn1Q64347 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clcn1Q64347 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Clcn1Q64347 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.11■□□□□ 0.17
Clcn1Q64347 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Clcn1Q64347 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Clcn1Q64347 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn1Q64347 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms