Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.28□□□□□ -0.12
Sycp1Q62209 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sycp1Q62209 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sycp1Q62209 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sycp1Q62209 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sycp1Q62209 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sycp1Q62209 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sycp1Q62209 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sycp1Q62209 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sycp1Q62209 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.27□□□□□ -0.12
Sycp1Q62209 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sycp1Q62209 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sycp1Q62209 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sycp1Q62209 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sycp1Q62209 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sycp1Q62209 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.27□□□□□ -0.12
Sycp1Q62209 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.27□□□□□ -0.12
Sycp1Q62209 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sycp1Q62209 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sycp1Q62209 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sycp1Q62209 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Sycp1Q62209 Gm16177-201ENSMUST00000120728 718 ntBASIC14.27□□□□□ -0.13
Sycp1Q62209 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.27□□□□□ -0.13
Sycp1Q62209 Gm43818-201ENSMUST00000200605 466 ntBASIC14.27□□□□□ -0.13
Sycp1Q62209 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sycp1Q62209 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.27□□□□□ -0.13
Sycp1Q62209 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Sycp1Q62209 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.27□□□□□ -0.13
Sycp1Q62209 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sycp1Q62209 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.26□□□□□ -0.13
Sycp1Q62209 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.26□□□□□ -0.13
Sycp1Q62209 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sycp1Q62209 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.26□□□□□ -0.13
Sycp1Q62209 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.26□□□□□ -0.13
Sycp1Q62209 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Sycp1Q62209 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sycp1Q62209 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sycp1Q62209 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.25□□□□□ -0.13
Sycp1Q62209 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sycp1Q62209 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.25□□□□□ -0.13
Sycp1Q62209 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.25□□□□□ -0.13
Sycp1Q62209 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sycp1Q62209 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.25□□□□□ -0.13
Sycp1Q62209 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.25□□□□□ -0.13
Sycp1Q62209 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sycp1Q62209 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms