Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
VcanQ62059 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.6□□□□□ -0.55
VcanQ62059 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
VcanQ62059 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.6□□□□□ -0.55
VcanQ62059 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.6□□□□□ -0.55
VcanQ62059 BC106175-202ENSMUST00000219344 1213 ntBASIC11.6□□□□□ -0.55
VcanQ62059 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.6□□□□□ -0.55
VcanQ62059 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
VcanQ62059 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.6□□□□□ -0.55
VcanQ62059 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
VcanQ62059 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.6□□□□□ -0.55
VcanQ62059 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Gm12857-201ENSMUST00000117678 592 ntBASIC11.59□□□□□ -0.55
VcanQ62059 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Gm29410-201ENSMUST00000188383 694 ntBASIC11.59□□□□□ -0.55
VcanQ62059 Gm42937-201ENSMUST00000197360 752 ntBASIC11.59□□□□□ -0.55
VcanQ62059 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.59□□□□□ -0.55
VcanQ62059 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.59□□□□□ -0.55
VcanQ62059 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.59□□□□□ -0.55
VcanQ62059 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.59□□□□□ -0.55
VcanQ62059 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.59□□□□□ -0.55
VcanQ62059 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.59□□□□□ -0.55
VcanQ62059 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.59□□□□□ -0.55
VcanQ62059 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.59□□□□□ -0.55
VcanQ62059 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.59□□□□□ -0.55
VcanQ62059 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VcanQ62059 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.55
VcanQ62059 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
VcanQ62059 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
VcanQ62059 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
VcanQ62059 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
VcanQ62059 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
VcanQ62059 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Gm12314-201ENSMUST00000118104 538 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.58□□□□□ -0.56
VcanQ62059 Gm38007-201ENSMUST00000192187 313 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Gm37197-201ENSMUST00000195607 401 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.58□□□□□ -0.56
VcanQ62059 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.58□□□□□ -0.56
VcanQ62059 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.58□□□□□ -0.56
VcanQ62059 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
VcanQ62059 Gm16296-201ENSMUST00000159905 325 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.58□□□□□ -0.56
VcanQ62059 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.58□□□□□ -0.56
VcanQ62059 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
VcanQ62059 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.58□□□□□ -0.56
VcanQ62059 Gm17214-201ENSMUST00000164501 541 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Gm9625-201ENSMUST00000180422 955 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC11.58□□□□□ -0.56
VcanQ62059 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VcanQ62059 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.58□□□□□ -0.56
VcanQ62059 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
VcanQ62059 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VcanQ62059 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms