Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm14833-201ENSMUST00000118345 1027 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm13689-201ENSMUST00000119360 685 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm6244-201ENSMUST00000178732 841 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm37490-201ENSMUST00000195566 724 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm19175-201ENSMUST00000199895 916 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC9.59□□□□□ -0.87
Foxc1Q61572 AC096628.1-201ENSMUST00000226060 641 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.59□□□□□ -0.87
Foxc1Q61572 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Foxc1Q61572 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Foxc1Q61572 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm12403-201ENSMUST00000121384 959 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.58□□□□□ -0.88
Foxc1Q61572 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm45733-201ENSMUST00000212988 437 ntBASIC9.58□□□□□ -0.88
Foxc1Q61572 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.58□□□□□ -0.88
Foxc1Q61572 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Foxc1Q61572 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms