Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Ecm1Q61508 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ecm1Q61508 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.99□□□□□ -0.17
Ecm1Q61508 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.99□□□□□ -0.17
Ecm1Q61508 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Gm22133-201ENSMUST00000102082 109 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 Gm24231-201ENSMUST00000104315 133 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.99□□□□□ -0.17
Ecm1Q61508 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Gm19353-201ENSMUST00000184561 445 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 Mir7032-201ENSMUST00000185154 79 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.99□□□□□ -0.17
Ecm1Q61508 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Ntng1-201ENSMUST00000051253 327 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ecm1Q61508 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.99□□□□□ -0.17
Ecm1Q61508 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.99□□□□□ -0.17
Ecm1Q61508 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ecm1Q61508 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ecm1Q61508 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ecm1Q61508 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm13035-201ENSMUST00000117496 342 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm23119-201ENSMUST00000158610 140 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ecm1Q61508 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm18038-201ENSMUST00000197900 485 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm44958-201ENSMUST00000203734 736 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm43962-201ENSMUST00000203898 190 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.98□□□□□ -0.17
Ecm1Q61508 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ecm1Q61508 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ecm1Q61508 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms