Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vsx2Q61412 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Vsx2Q61412 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vsx2Q61412 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.4□□□□□ -0.42
Vsx2Q61412 Gm16479-201ENSMUST00000121706 932 ntBASIC12.4□□□□□ -0.42
Vsx2Q61412 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Gm26185-201ENSMUST00000157692 266 ntBASIC12.4□□□□□ -0.42
Vsx2Q61412 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.4□□□□□ -0.42
Vsx2Q61412 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Gm19931-201ENSMUST00000198920 368 ntBASIC12.4□□□□□ -0.42
Vsx2Q61412 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.4□□□□□ -0.42
Vsx2Q61412 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.4□□□□□ -0.42
Vsx2Q61412 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Vsx2Q61412 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.4□□□□□ -0.42
Vsx2Q61412 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vsx2Q61412 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vsx2Q61412 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vsx2Q61412 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Vsx2Q61412 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vsx2Q61412 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vsx2Q61412 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vsx2Q61412 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.39□□□□□ -0.43
Vsx2Q61412 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.39□□□□□ -0.43
Vsx2Q61412 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vsx2Q61412 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Mir686-201ENSMUST00000102174 109 ntBASIC12.38□□□□□ -0.43
Vsx2Q61412 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Gm8062-201ENSMUST00000139696 444 ntBASIC12.38□□□□□ -0.43
Vsx2Q61412 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Gm7029-201ENSMUST00000173226 450 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms