Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.8□□□□□ -0.36
Six4Q61321 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Six4Q61321 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Six4Q61321 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Six4Q61321 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Six4Q61321 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.8□□□□□ -0.36
Six4Q61321 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Six4Q61321 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.8□□□□□ -0.36
Six4Q61321 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.8□□□□□ -0.36
Six4Q61321 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Six4Q61321 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Gm5904-201ENSMUST00000210286 865 ntBASIC12.8□□□□□ -0.36
Six4Q61321 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.8□□□□□ -0.36
Six4Q61321 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.8□□□□□ -0.36
Six4Q61321 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Six4Q61321 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Six4Q61321 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.8□□□□□ -0.36
Six4Q61321 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.8□□□□□ -0.36
Six4Q61321 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six4Q61321 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Six4Q61321 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.79□□□□□ -0.36
Six4Q61321 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Six4Q61321 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Gm13736-201ENSMUST00000119272 253 ntBASIC12.79□□□□□ -0.36
Six4Q61321 Gm11597-201ENSMUST00000121423 964 ntBASIC12.79□□□□□ -0.36
Six4Q61321 Gm14760-201ENSMUST00000121831 999 ntBASIC12.79□□□□□ -0.36
Six4Q61321 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Gm8018-201ENSMUST00000173536 789 ntBASIC12.79□□□□□ -0.36
Six4Q61321 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Six4Q61321 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Six4Q61321 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.79□□□□□ -0.36
Six4Q61321 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Six4Q61321 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.79□□□□□ -0.36
Six4Q61321 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Six4Q61321 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Six4Q61321 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Six4Q61321 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.78□□□□□ -0.36
Six4Q61321 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Six4Q61321 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.78□□□□□ -0.36
Six4Q61321 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Gm13875-201ENSMUST00000120162 282 ntBASIC12.78□□□□□ -0.36
Six4Q61321 Gm13315-201ENSMUST00000120376 991 ntBASIC12.78□□□□□ -0.36
Six4Q61321 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.78□□□□□ -0.36
Six4Q61321 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.78□□□□□ -0.36
Six4Q61321 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.78□□□□□ -0.36
Six4Q61321 Gm44405-201ENSMUST00000198952 126 ntBASIC12.78□□□□□ -0.36
Six4Q61321 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.78□□□□□ -0.36
Six4Q61321 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms