Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm19091-201ENSMUST00000208120 978 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm22877-201ENSMUST00000175451 105 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.92□□□□□ -0.18
Col11a1Q61245 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.92□□□□□ -0.18
Col11a1Q61245 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.91□□□□□ -0.18
Col11a1Q61245 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col11a1Q61245 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col11a1Q61245 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col11a1Q61245 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.91□□□□□ -0.18
Col11a1Q61245 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.91□□□□□ -0.18
Col11a1Q61245 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.91□□□□□ -0.18
Col11a1Q61245 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.91□□□□□ -0.18
Col11a1Q61245 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col11a1Q61245 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.91□□□□□ -0.18
Col11a1Q61245 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.91□□□□□ -0.18
Col11a1Q61245 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col11a1Q61245 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col11a1Q61245 Gm26013-201ENSMUST00000104404 119 ntBASIC13.9□□□□□ -0.18
Col11a1Q61245 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
Col11a1Q61245 Gm15207-201ENSMUST00000119259 442 ntBASIC13.9□□□□□ -0.18
Col11a1Q61245 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 Gm4310-201ENSMUST00000177847 889 ntBASIC13.9□□□□□ -0.18
Col11a1Q61245 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.9□□□□□ -0.18
Col11a1Q61245 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 Gm5714-201ENSMUST00000197343 566 ntBASIC13.9□□□□□ -0.18
Col11a1Q61245 Mt1-202ENSMUST00000211807 1085 ntBASIC13.9□□□□□ -0.18
Col11a1Q61245 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col11a1Q61245 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col11a1Q61245 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col11a1Q61245 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms