Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Gm13315-201ENSMUST00000120376 991 ntBASIC15.23■□□□□ 0.03
Vps54Q5SPW0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps54Q5SPW0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Gm3961-201ENSMUST00000204425 994 ntBASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Gm7783-201ENSMUST00000204795 781 ntBASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.22■□□□□ 0.03
Vps54Q5SPW0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps54Q5SPW0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Gm13350-201ENSMUST00000120519 479 ntBASIC15.21■□□□□ 0.03
Vps54Q5SPW0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.21■□□□□ 0.03
Vps54Q5SPW0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.21■□□□□ 0.03
Vps54Q5SPW0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Vps54Q5SPW0 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.21■□□□□ 0.02
Vps54Q5SPW0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps54Q5SPW0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps54Q5SPW0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps54Q5SPW0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps54Q5SPW0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps54Q5SPW0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms