Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim41Q5NCC3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Gm9358-201ENSMUST00000183067 927 ntBASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Gm44552-201ENSMUST00000205458 1247 ntBASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Gm45856-201ENSMUST00000212752 416 ntBASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Gm3028-201ENSMUST00000213805 1119 ntBASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 AC123665.1-201ENSMUST00000228204 438 ntBASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC22.04■■□□□ 1.12
Trim41Q5NCC3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Gm9924-202ENSMUST00000192760 2311 ntBASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Gm12628-201ENSMUST00000122193 382 ntBASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Gm5732-201ENSMUST00000182596 1007 ntBASIC22.03■■□□□ 1.12
Trim41Q5NCC3 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Gm43275-201ENSMUST00000202053 1020 ntBASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim41Q5NCC3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Gm14999-201ENSMUST00000121039 624 ntBASIC22.02■■□□□ 1.12
Trim41Q5NCC3 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Gm23153-201ENSMUST00000175323 313 ntBASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Gm37028-201ENSMUST00000194276 107 ntBASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Gm43692-201ENSMUST00000198236 1062 ntBASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim41Q5NCC3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms