Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Srrm1Q52KI8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm12380-201ENSMUST00000119012 544 ntBASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm14999-201ENSMUST00000121039 624 ntBASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm14832-201ENSMUST00000121289 322 ntBASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Srrm1Q52KI8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm15432-201ENSMUST00000121106 195 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm10051-201ENSMUST00000145209 414 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm19353-201ENSMUST00000184561 445 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm44551-201ENSMUST00000208804 171 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Srrm1Q52KI8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srrm1Q52KI8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms