Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Shisa3Q3UPR0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Gm27772-201ENSMUST00000184900 187 ntBASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.02□□□□□ -0.65
Shisa3Q3UPR0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Gm37293-201ENSMUST00000191658 295 ntBASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shisa3Q3UPR0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa3Q3UPR0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms