Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Rubie-203ENSMUST00000227803 2430 ntBASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Upf3bQ3ULL6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm12742-201ENSMUST00000117326 410 ntBASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm12502-201ENSMUST00000120197 444 ntBASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm38092-201ENSMUST00000195600 653 ntBASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Gm24526-201ENSMUST00000082921 158 ntBASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upf3bQ3ULL6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Gm3890-201ENSMUST00000182416 207 ntBASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Gm19184-201ENSMUST00000196798 928 ntBASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upf3bQ3ULL6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms