Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Gm4271-201ENSMUST00000174444 973 ntBASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Gm5035-201ENSMUST00000215581 927 ntBASIC11.98□□□□□ -0.49
Brf2Q3UAW9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.98□□□□□ -0.49
Brf2Q3UAW9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Brf2Q3UAW9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Gm4768-201ENSMUST00000206199 686 ntBASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Brf2Q3UAW9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Brf2Q3UAW9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms