Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43aQ3TL54 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Gm15371-201ENSMUST00000117057 784 ntBASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Gm27390-201ENSMUST00000184516 176 ntBASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Gm44069-201ENSMUST00000204898 506 ntBASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.48□□□□□ -0.25
Trim43aQ3TL54 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim43aQ3TL54 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Gm6180-201ENSMUST00000065243 498 ntBASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43aQ3TL54 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Gm11478-201ENSMUST00000117851 599 ntBASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Gm12091-201ENSMUST00000146791 830 ntBASIC13.46□□□□□ -0.25
Trim43aQ3TL54 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43aQ3TL54 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms