Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Gm6433-201ENSMUST00000118634 875 ntBASIC10.41□□□□□ -0.74
Trim63Q38HM4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Gm37153-201ENSMUST00000193637 231 ntBASIC10.41□□□□□ -0.74
Trim63Q38HM4 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC10.41□□□□□ -0.74
Trim63Q38HM4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.41□□□□□ -0.74
Trim63Q38HM4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.4□□□□□ -0.74
Trim63Q38HM4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.4□□□□□ -0.74
Trim63Q38HM4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.4□□□□□ -0.74
Trim63Q38HM4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.4□□□□□ -0.74
Trim63Q38HM4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Gm19184-201ENSMUST00000196798 928 ntBASIC10.4□□□□□ -0.74
Trim63Q38HM4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim63Q38HM4 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trim63Q38HM4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trim63Q38HM4 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Trim63Q38HM4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trim63Q38HM4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trim63Q38HM4 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trim63Q38HM4 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trim63Q38HM4 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms