Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Gm23595-201ENSMUST00000104306 130 ntBASIC11.3□□□□□ -0.6
Chd8Q09XV5 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.3□□□□□ -0.6
Chd8Q09XV5 Gm30055-201ENSMUST00000203175 803 ntBASIC11.3□□□□□ -0.6
Chd8Q09XV5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.3□□□□□ -0.6
Chd8Q09XV5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Gm10580-201ENSMUST00000097985 396 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 Gm10581-201ENSMUST00000097986 231 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 Gm10582-201ENSMUST00000097987 396 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 Gm10583-201ENSMUST00000097988 396 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.29□□□□□ -0.6
Chd8Q09XV5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Chd8Q09XV5 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm23132-201ENSMUST00000104254 132 ntBASIC11.28□□□□□ -0.6
Chd8Q09XV5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.28□□□□□ -0.6
Chd8Q09XV5 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.28□□□□□ -0.6
Chd8Q09XV5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm13981-201ENSMUST00000122360 447 ntBASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd8Q09XV5 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms