Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm23270-201ENSMUST00000104055 131 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm11531-201ENSMUST00000117614 555 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ebf1Q07802 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm44967-201ENSMUST00000207047 631 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm5950-201ENSMUST00000213337 772 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Ebf1Q07802 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf1Q07802 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.88□□□□□ -0.35
Ebf1Q07802 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.87□□□□□ -0.35
Ebf1Q07802 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.87□□□□□ -0.35
Ebf1Q07802 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Gm14028-201ENSMUST00000117434 479 ntBASIC12.87□□□□□ -0.35
Ebf1Q07802 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf1Q07802 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.87□□□□□ -0.35
Ebf1Q07802 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.87□□□□□ -0.35
Ebf1Q07802 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms