Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Col17a1Q07563 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC19.07■□□□□ 0.64
Col17a1Q07563 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Gm15982-201ENSMUST00000121681 554 ntBASIC19.07■□□□□ 0.64
Col17a1Q07563 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Gm5267-201ENSMUST00000191574 1045 ntBASIC19.07■□□□□ 0.64
Col17a1Q07563 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Col17a1Q07563 AC112945.1-201ENSMUST00000226413 514 ntBASIC19.07■□□□□ 0.64
Col17a1Q07563 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col17a1Q07563 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col17a1Q07563 Gm5380-201ENSMUST00000119296 2136 ntBASIC19.07■□□□□ 0.64
Col17a1Q07563 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Col17a1Q07563 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col17a1Q07563 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col17a1Q07563 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col17a1Q07563 Gm38103-201ENSMUST00000191707 864 ntBASIC19.06■□□□□ 0.64
Col17a1Q07563 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC19.06■□□□□ 0.64
Col17a1Q07563 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC19.06■□□□□ 0.64
Col17a1Q07563 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col17a1Q07563 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC19.05■□□□□ 0.64
Col17a1Q07563 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Mmp14-206ENSMUST00000225641 3238 ntBASIC19.05■□□□□ 0.64
Col17a1Q07563 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col17a1Q07563 Mir7221-201ENSMUST00000184009 72 ntBASIC19.05■□□□□ 0.64
Col17a1Q07563 Gm44958-201ENSMUST00000203734 736 ntBASIC19.05■□□□□ 0.64
Col17a1Q07563 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Gm5449-201ENSMUST00000081132 357 ntBASIC19.05■□□□□ 0.64
Col17a1Q07563 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Col17a1Q07563 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC19.05■□□□□ 0.64
Col17a1Q07563 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col17a1Q07563 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col17a1Q07563 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Gm23439-201ENSMUST00000104292 132 ntBASIC19.04■□□□□ 0.64
Col17a1Q07563 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
Col17a1Q07563 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col17a1Q07563 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC19.04■□□□□ 0.64
Col17a1Q07563 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC19.04■□□□□ 0.64
Col17a1Q07563 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col17a1Q07563 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC19.04■□□□□ 0.64
Col17a1Q07563 Gm37736-201ENSMUST00000193564 2802 ntBASIC19.04■□□□□ 0.64
Col17a1Q07563 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col17a1Q07563 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col17a1Q07563 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col17a1Q07563 Gm12345-201ENSMUST00000119288 898 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms