Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.62□□□□□ -0.55
Scn1bP97952 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Scn1bP97952 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scn1bP97952 Map1b-203ENSMUST00000223725 2669 ntBASIC11.62□□□□□ -0.55
Scn1bP97952 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Scn1bP97952 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.61□□□□□ -0.55
Scn1bP97952 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm15653-201ENSMUST00000119247 907 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm15393-201ENSMUST00000120499 219 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm13385-201ENSMUST00000121089 220 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.61□□□□□ -0.55
Scn1bP97952 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Scn1bP97952 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm27533-201ENSMUST00000183800 152 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm17837-201ENSMUST00000186435 985 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.61□□□□□ -0.55
Scn1bP97952 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm9229-201ENSMUST00000222777 126 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm8396-201ENSMUST00000057361 823 ntBASIC11.61□□□□□ -0.55
Scn1bP97952 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Scn1bP97952 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Scn1bP97952 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scn1bP97952 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
Scn1bP97952 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.6□□□□□ -0.55
Scn1bP97952 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.6□□□□□ -0.55
Scn1bP97952 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.6□□□□□ -0.55
Scn1bP97952 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Scn1bP97952 Gm12428-201ENSMUST00000119844 727 ntBASIC11.6□□□□□ -0.55
Scn1bP97952 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 Gm22175-201ENSMUST00000175007 78 ntBASIC11.6□□□□□ -0.55
Scn1bP97952 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scn1bP97952 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms