Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm6754-201ENSMUST00000117124 913 ntBASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm11989-201ENSMUST00000117240 672 ntBASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm11362-201ENSMUST00000118838 850 ntBASIC15.87■□□□□ 0.13
Nkx2-3P97334 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.87■□□□□ 0.13
Nkx2-3P97334 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.87■□□□□ 0.13
Nkx2-3P97334 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nkx2-3P97334 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.86■□□□□ 0.13
Nkx2-3P97334 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Gm27627-201ENSMUST00000183644 150 ntBASIC15.86■□□□□ 0.13
Nkx2-3P97334 Mir7032-201ENSMUST00000185154 79 ntBASIC15.86■□□□□ 0.13
Nkx2-3P97334 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.86■□□□□ 0.13
Nkx2-3P97334 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.86■□□□□ 0.13
Nkx2-3P97334 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.86■□□□□ 0.13
Nkx2-3P97334 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.86■□□□□ 0.13
Nkx2-3P97334 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Gm24934-201ENSMUST00000103764 111 ntBASIC15.85■□□□□ 0.13
Nkx2-3P97334 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.85■□□□□ 0.13
Nkx2-3P97334 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.85■□□□□ 0.13
Nkx2-3P97334 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-3P97334 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-3P97334 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms