Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SgcdP82347 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcdP82347 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SgcdP82347 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SgcdP82347 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcdP82347 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Gm22189-201ENSMUST00000103822 86 ntBASIC11.83□□□□□ -0.52
SgcdP82347 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.83□□□□□ -0.52
SgcdP82347 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SgcdP82347 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.83□□□□□ -0.52
SgcdP82347 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.83□□□□□ -0.52
SgcdP82347 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.83□□□□□ -0.52
SgcdP82347 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.83□□□□□ -0.52
SgcdP82347 Gm18624-201ENSMUST00000220966 658 ntBASIC11.83□□□□□ -0.52
SgcdP82347 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
SgcdP82347 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.83□□□□□ -0.52
SgcdP82347 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
SgcdP82347 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcdP82347 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.83□□□□□ -0.52
SgcdP82347 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcdP82347 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcdP82347 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.82□□□□□ -0.52
SgcdP82347 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.82□□□□□ -0.52
SgcdP82347 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcdP82347 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SgcdP82347 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SgcdP82347 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SgcdP82347 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
SgcdP82347 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
SgcdP82347 Gm4984-201ENSMUST00000115987 360 ntBASIC11.82□□□□□ -0.52
SgcdP82347 Gm15460-201ENSMUST00000118147 391 ntBASIC11.82□□□□□ -0.52
SgcdP82347 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.82□□□□□ -0.52
SgcdP82347 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Gm10766-202ENSMUST00000194123 606 ntBASIC11.82□□□□□ -0.52
SgcdP82347 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.82□□□□□ -0.52
SgcdP82347 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Gm45841-201ENSMUST00000207700 164 ntBASIC11.82□□□□□ -0.52
SgcdP82347 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.82□□□□□ -0.52
SgcdP82347 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.82□□□□□ -0.52
SgcdP82347 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcdP82347 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.82□□□□□ -0.52
SgcdP82347 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcdP82347 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.82□□□□□ -0.52
SgcdP82347 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcdP82347 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcdP82347 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SgcdP82347 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms