Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm12384-201ENSMUST00000119228 919 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm16177-201ENSMUST00000120728 718 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm1335-201ENSMUST00000121653 386 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Mir1982-201ENSMUST00000157368 74 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm25927-201ENSMUST00000175058 117 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm45784-201ENSMUST00000188360 142 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm25857-201ENSMUST00000082788 129 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm10268-201ENSMUST00000085340 555 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.61□□□□□ -0.71
Pdlim4P70271 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.61□□□□□ -0.71
Pdlim4P70271 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdlim4P70271 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pdlim4P70271 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.6□□□□□ -0.71
Pdlim4P70271 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Gm13226-201ENSMUST00000117838 404 ntBASIC10.6□□□□□ -0.71
Pdlim4P70271 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.6□□□□□ -0.71
Pdlim4P70271 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.6□□□□□ -0.71
Pdlim4P70271 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms