Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.05□□□□□ -0.96
Rpl39P62892 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm27618-201ENSMUST00000183671 60 ntBASIC9.05□□□□□ -0.96
Rpl39P62892 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.05□□□□□ -0.96
Rpl39P62892 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.05□□□□□ -0.96
Rpl39P62892 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.05□□□□□ -0.96
Rpl39P62892 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Map1b-203ENSMUST00000223725 2669 ntBASIC9.05□□□□□ -0.96
Rpl39P62892 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Rpl39P62892 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Gm17837-201ENSMUST00000186435 985 ntBASIC9.04□□□□□ -0.96
Rpl39P62892 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.04□□□□□ -0.96
Rpl39P62892 AW822252-206ENSMUST00000208904 237 ntBASIC9.04□□□□□ -0.96
Rpl39P62892 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.04□□□□□ -0.96
Rpl39P62892 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.04□□□□□ -0.96
Rpl39P62892 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rpl39P62892 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Rpl39P62892 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rpl39P62892 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Rpl39P62892 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Rpl39P62892 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rpl39P62892 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Rpl39P62892 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.03□□□□□ -0.96
Rpl39P62892 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Rpl39P62892 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rpl39P62892 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms